Do Horizontal Gene Transfer, Symbiogenesis, Speciation by Hybridization and Introgression Really Bring Difficulties for the Cladogenetic Conception of Evolution?

Authors

DOI:

https://doi.org/10.35588/cc.v3i1.5385

Keywords:

Phylogenesis, Speciation by hybridization, Introgression, Symbiogenesis, HGT

Abstract

In recent years, some authors have argued that the validity of the arborescent representation of the phyletic pattern generated by evolution is being undermined by the recognition of the evolutionary impact of horizontal gene transfer (HGT), symbiogenesis, speciation by hybridization and introgression. This cladogenetic conception, or representation, of evolution would allow us to see only a partial aspect of the genealogical relationships that connect the different lineages of living beings; hiding another aspect whose more adequate representation would be a reticulation of relationships between taxa. However, even without questioning the frequency and explanatory relevance of such phenomena, this paper will try to show that their admission and recognition do not need to be detrimental for the cladogenetic conception of evolution whose relativization is being proclaimed. On the contrary, the understanding and representation of those phenomena presupposes that conception. 

Downloads

Download data is not yet available.

References

Abbott, R. y Rieseberg, L. (2012). “Hybrid Speciation”. Encyclopaedia of Life Sciences (eLS). Chichester: John Wiley & son. https://doi.org/h3hw

Abbott, R., Albach, D., Ansell, S., Arntzen, J., Baird, J., Bierne, N., Boughman, J., Brelsford, A, Buerkle, C., Buggs, R., Butlin, R., Dieckmann, D., Eroukhmanoff, F., Grill, A., Cahan, S., Hermansen, J., Hewitt, G., Hudson, A., Jiggins, C., … y Zinner, D. (2013). “Hybridization and speciation”. Journal of Evolutionary Biology, 26: 229–246. https://doi.org/f24mbz

Abbya, S., Tanniera, E., Gouya, M. y Daubina, V. (2012). “Lateral gene transfer as a support for the tree of life”. PNAS, 109 (13): 4962-4967. https://doi.org/h3hm

Abercrombie, M.; Hickman, C.; Johnson, M. (1957). Dictionary of Biology. Baltimore: Penguin.

Amorim, D. (1997). Elementos básicos de Sistemática Filogenética. Ribeirão Preto: Holos.

Andersson, J. (2005). “Lateral gene transfer in eukaryotes”. Cellular and Molecular Life Sciences, 62: 1182–1197. https://doi.org/c749n4

Avni, E. y Snir, S (2020). “A New Phylogenomic Approach For Quantifying Horizontal Gene Transfer Trends in Prokaryotes”. Scientific Reports, 10:12425. https://doi.org/h3hr

Bapteste, E., O'malley, M., Beiko, R., Ereshefsky, M., Gogarten, P., Franklin-Hall, L., Lapointe, F., Dupré, J., Dagan, T., Boucher, Y. y Martin, W. (2009). “Prokaryotic evolution and the tree of life are two different things”. Biology Direct, 4:34. https://doi.org/b5jpn8

Beiko, R. (2010). “Gene sharing and genome evolution: networks in trees and trees in network”. Biology & Philosophy, 25: 659-673. https://doi.org/ct2rjf

Bouchard, F. (2010). “Symbiosis, lateral function transfer and the (many) sampling of life”. Biology & Philosophy, 25: 623-641. https://doi.org/ddj35r

Bowler, P. (1996). Life’s splendid drama. Chicago: Chicago University Press.

Caponi, G. (2011). La segunda agenda darwiniana. México: Centro Lombardo Toledano.

Caponi, G. (2017). El darwinismo de Ameghino. Florianópolis: Universidade Federal de Santa Catarina.

Caponi, G. (2020a). “Los conceptos de herencia y de variación hereditaria”. Endoxa, 46:273-290. https://doi.org/h3ht

Caponi, G. (2020b). “El concepto evolucionario de linaje”. Revista Colombiana de Filosofía de las Ciencias, 20(41): 11-39. https://doi.org/h3nj

Cavalli-Sforza, L. y Cavalli-Sforza, F. (1994). Qui sommes-nous? Paris: Flammarion.

Coyne, J. y Orr, A. (2004). Speciation. Sunderland: Sinauer.

Crick, F. (1958). “On protein synthesis”. Symposia of the Society for Experimental Biology, 12: 138-63.

Darwin, C. (1859). On the origin of species. London: Murray.

Deleuze, G. y Guattari, F. (1980). Mille plateaux. Paris: Minuit.

Doolittle, W. (1999a). “Phylogenetic classification and the universal tree”. Science, 284 (5423): 2124-2128. https://doi.org/fjvz76

Doolittle, W. (1999b). “Lateral genomics”. Trends in Biochemical Sciences, 24(12): M5-M8. https://doi.org/d9s6mp

Doolittle, W. (2000). “Uprooting the tree of life”. Scientific American, 282(2): 90-95. https://doi.org/fhq7jr

Doolittle, W. (2005). “If the tree of life fell, would it make a sound?”. En J. Sapp (ed.). Microbial phylogeny and evolution: Concepts and controversies (pp. 119-133). Oxford: Oxford University Press.

Doolittle, W. (2010). “The attempt of the life of the tree of life: science, philosophy and politics”. Biology & Philosophy, 25: 455-473. https://doi.org/bfpr85

Doolittle, W. y Brunet, T. (2016): “What is the tree of life?” PLOS Genetics, 12(4): e1005912. https://doi.org/gnw9nr

Doolittle, W., Boucher, Y., Douady, C., Papke, T., Walsh, D., Boudreau, M., Nesbø, C. y Case, R (2003). “Lateral gene transfer and the origins of prokaryotic groups”. Annual Review of Genetics, 37: 283-328. https://doi.org/fk8bm2

Doolittle, W., Gogarten, P. y Lawrence, J. (2002). “Prokaryotic Evolution in Light of Gene Transfer”. Molecular Biology & Evolution, 19(12): 2226–2238. https://doi.org/fx74pj

Dunning, J., Clark, M., Oliveira, D., Foster, J., Fischer, P., Muñoz, M., Giebel, J., Kumar, N., Ishmael, N., Wang, S., Ingram, J., Nene, R., Shepard, J., Tomkins, J., Richards, S., Spiro, D., Ghedin, E., Slatko, B., Tettelin, H. y Werren, J. (2007). “Widespread Lateral Gene Transfer from Intracellular Bacteria to Multicellular Eukaryotes”. Science, 317(5845): 1753-1755. https://doi.org/brx7s8

Eldredge, N. y Cracraft, J. (1980). Phylogenetic patterns and the evolutionary process. New York: Columbia University Press.

Franklin-Hall, L. (2010). “Trashing life’s tree”. Biology & Philosophy, 25: 689-709. https://doi.org/c822gv

Futuyma, D. (2010). “Evolutionary Biology: 150 years of progress”. En M. Bel, D. Futuyma, W. Eanes y J. Levinton (eds.). Evolution since Darwin: the first 150 years (pp. 3-30). Sunderland: Sinauer.

Gayon, J. (2011). “The tree of life reconsidered”. En J. Martínez-Contreras y A. Ponce de León (eds.), Darwin’s evolving legacy (pp. 48-65). México: Siglo XXI.

Godfrey-Smith, P. (2009). Darwinian population and natural selection. Oxford: Oxford University Press.

Godfrey-Smith, P. (2014). Philosophy of Biology. Princeton: Princeton University Press.

Graham, L. y Davies, P. (2021). “Horizontal Gene Transfer in Vertebrates: A Fishy Tale”. Trends in Genetics, 37(6): 501-503. https://doi.org/gk7shq

Grant, P. y Grant, R. (2008). How and why species multiply: the radiation of Darwin’s finches. Princeton: Princeton University Press. https://doi.org/h3hz

Heams, T. (2009). “Hérédité”. En T. Heams, P. Huneman, G. Lecointre, M. Silberstein (eds.): Les mondes darwiniens (pp. 71-92). Paris: Editions Matériologiques.

Hennig, W. (1968). Elementos de Sistemática Filogenética. Buenos Aires: Eudeba.

Hillis, D. (2010). “Phylogenetic progress and applications of the tree of life”. En M. Bel, D. Futuyma, W. Eanes y J. Levinton (eds.). Evolution since Darwin: the first 150 years (pp. 421-450). Sunderland: Sinauer.

Holland, P. (2005). “The fall and rise of Evolutionary Developmental Biology”. En D. Williams y P. Forey (eds.), Milestones in Systematics (pp. 261-265). London: CRC Press.

Keeling, P.; y Palmer, J. (2008). “Horizontal gene transfer in eukaryotic evolution”. Nature Reviews Genetics, 9: 604-618. https://doi.org/fqbv8j

Kitcher, P. (2001). El avance de la ciencia. México: UNAM.

Koonin, E. (2009). Darwinian evolution in the light of genomics. Nucleic Acids Research, 37(4): 1011-1034. https://doi.org/fjhq8g

Le Guyader, H. (2003). Classification et évolution. Paris: Le Pommier.

Ledford, H. (25 de marzo de 2021). First known gene transfer from plant to insect identified. Nature News. https://doi.org/h3h2

Mamalipour, M., Seidi, K., Zununi, S., Jahanban-Esfahlan, V., Jaymand, M., Majdi, H., Amoozgar, Z., Javaheri, T., Jahanban-Esfahlan, R. y Peyman, Z. (2020): “Horizontal Gene Transfer: from evolutionary flexibility to disease progression. Frontiers in Cell and Developmental Biology, 8:229. https://doi.org/h3h4

Margulis, L. (1992). “Symbiosis theory: cells as microbial communities”. En L. Margulis y L. Olendzenski (eds.): Environmental evolution (pp. 173-200). Cambridge: MIT Press.

Margulis, L. y Sagan, D. (1995). Microcosmos. Tusquets, Barcelona.

Martin, W. (2005). “The missing link between hydrogenosomes and mitochondria”. Trends in Microbiology, 13(10): 457-459. https://doi.org/dkdrgc

Mayr, E. (1992). Una larga controversia: Darwin y el darwinismo. Barcelona: Crítica.

Merlin, F. (2017). “Limited extended inheritance”. En P. Huneman y D. Walsh (eds.), Challenges in Evolutionary Theory (pp. 285-301). Oxford: Oxford University Press.

Meyer, D. (1997). “Análise filogenética de sequências de DNA”. En D. Amorim (ed.). Elementos básicos de Sistemática Filogenética (pp. 187-210). Ribeirão Preto: Holos.

Mindell, D. (2013). “The tree of life: metaphor, model, and heuristic device”. Systematic Biology, 62(3): 479-489. https://doi.org/ggbq25

O’Malley, M. y Boucher, Y. (2005). “Paradigm change in evolutionary microbiology”. Studies in History and Philosophy of Biological and Biomedical Sciences, 36: 183-208. https://doi.org/fr6sn6

O’Malley, M., Martin, W. y Dupré, J. (2010). The tree of life: introduction to an evolutionary debate. Biology & Philosophy, 25: 441-453. https://doi.org/dmxh3q

Ochman, H., Lawrence, J. y Groisman, E. (2000). “Lateral gene transfer and the nature of bacterial innovation”. Nature, 405: 299-304. https://doi.org/bnspkk

Ospovat, D. (1981). The development of Darwin’s theory. Cambridge: Cambridge University Press.

Panchen, A. (1992). Classification, evolution and the nature of Biology. Cambridge: Cambridge University Press. https://doi.org/ffjpp2

Power, J., Pinheiro, F., Pompei, S., Kovacova, V., Yüksel, I., Rathmann, M., Förster, Mona, Lässig, M. y Maier, B. (2021). “Adaptive evolution of hybrid bacteria by horizontal gene transfer”. PNAS, 118 (10): e2007873118. https://doi.org/gns4c9 .

Raoult, D. (2010). The post-Darwinist rhizome of life. The Lancet, 375: 104-105. https://doi.org/crfndh

Richards, R. (2016). Biological Classification. Cambridge: Cambridge University Press.

Russell, E. (1916). Form and function. London: Murray.

Salgado, L. y Arcucci, A. (2016). Teorías de la evolución. Viedma: Universidad Nacional de Rio Negro.

Schwartz, R. y Dayhoff, M. (1978). “Origins of prokaryotes, eukaryotes, mitochondria and chloroplasts”. Science, 199 (4327): 395-403. https://doi.org/b4vqcj

Sober, E. (2008). Evidence and evolution. Cambridge: Cambridge University Press. https://doi.org/h35x

Suarez, E. (2007). “The rhetoric of informational molecules: authority and promises in the early study of molecular evolution”. Science in Context, 20(4): 649-677. https://doi.org/bszxpz

Suárez, E. y Anaya, V. (2008). “History, objectivity, and the construction of molecular phylogenies”. Studies in the History and Philosophy of Biological & Biomedical Sciences, 39(4): 451-468. https://doi.org/fhd7gw

Swithers, K. y Katz, L. (2013). “Reconstructing the Tree of Life”. Microbe, 8(6): 249-253. https://doi.org/h35z

Tassy, P. (1998). L’arbre à remonter le temps. Paris: Diderot.

Tassy, P. (2000). Le paléontologue et l’évolution. Paris: Le Pommier.

Torres, S. y Prosdocimi, F. (2019). A emergência dos sistemas biológicos. Rio de Janeiro: Artecomciência.

Waters, K. (2003). “The arguments in the Origin of Species”. En J. Hodge y G. Radick (eds.): The Cambridge companion to Darwin (pp. 116-137.). Cambridge: Cambridge University Press.

Wiley, E. & Lieberman, B. (2011). Phylogenetics. Hoboken: Wiley-Blackwell. https://doi.org/bhhwhj

Zuckerkandl, E. y Pauling, L. (1965). Evolutionary divergence and convergence in proteins. En V. Brysona y H. Vogel (eds.). Evolving genes and proteins (pp. 97-166). Cambridge: Academic Press. https://doi.org/gf4ft7

Downloads

Published

2022-07-31

Issue

Section

Dossier Problems of Contemporary Philosophy of Biology

How to Cite

Do Horizontal Gene Transfer, Symbiogenesis, Speciation by Hybridization and Introgression Really Bring Difficulties for the Cladogenetic Conception of Evolution?. (2022). Culturas Científicas, 3(1), 3-18. https://doi.org/10.35588/cc.v3i1.5385